FastQC a quality-control tool for high-throughput sequence data.

These transcriptomic data will be beneficial for studying transcriptome of Garcinia mangostana L.įruit Ion Proton Mangosteen RNA-Seq Transcriptome.Īndrews S. The unigenes were annotated with two main databases from NCBI and UniProtKB, respectively having annotated-sequences of 73,287 and 73,107, respectively. Transcript/unigene length ranged from 201 to 5916 bp. We obtained 268,851 transcripts as well as 155,850 unigenes, having N50 value of 555 and 433 bp, respectively. The raw data obtained in this study can be accessible in DDBJ database with accession number of DRA005014 with bioproject accession number of PRJDB5091. We obtained the raw data from 12 libraries through Ion Proton System. In the present study, we performed de novo transcriptomic analysis of Garcinia mangostana L. (Mangosteen), of the family Clusiaceae, is one of the economically important tropical fruits in Indonesia. 4 United Graduate School of Agricultural Sciences, Tokyo University of Agriculture and Technology, Saiwai, Fuchu, Tokyo 183-8509, Japan College of Agriculture, Ibaraki University, 3-21-1 Chuo, Ami, Inashiki, Ibaraki 300-0393, Japan.

3 Department of Agronomy and Horticulture, Faculty of Agriculture, Bogor Agricultural University, IPB Dramaga Campus, Bogor, West Java 16680, Indonesia.

2 Department of Applied Biological Science, Faculty of Agriculture, University of Agriculture and Technology, Saiwai, Fuchu, Tokyo 183-8509, Japan.

1 United Graduate School of Agricultural Sciences, Tokyo University of Agriculture and Technology, Saiwai, Fuchu, Tokyo 183-8509, Japan Department of Agronomy and Horticulture, Faculty of Agriculture, Bogor Agricultural University, IPB Dramaga Campus, Bogor, West Java 16680, Indonesia College of Agriculture, Ibaraki University, 3-21-1 Chuo, Ami, Inashiki, Ibaraki 300-0393, Japan.

Ami 2016.09 libjansson